2(R)-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)-3-(1H-indole-3-yl)propanoic acid, α-(aminomethyl)- | 1534392-32-9

• 分子结构分类: 有机化合物 - 有机杂环化合物 - 吲哚及其衍生物
• 英文名称: 2(R)-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)-3-(1H-indole-3-yl)propanoic acid, α-(aminomethyl)-
• 英文别名: (2R)-2-[(1,3-dioxoisoindol-2-yl)methyl]-3-(1H-indol-3-yl)propanoic acid
• CAS: 1534392-32-9
• 化学式: C₂₀H₁₆N₂O₄
• 分子量: 348.358
• InChiKey: XSKSWQAKAGNVQO-CYBMUJFWSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  2.5
• 重原子数：
  26
• 可旋转键数：
  5
• 环数：
  4.0
• sp3杂化的碳原子比例：
  0.15
• 拓扑面积：
  90.5
• 氢给体数：
  2
• 氢受体数：
  4

反应信息

• 作为产物：
  描述：

  3-吲哚丙酸 在 三氟甲磺酸三甲基硅酯 、 20% palladium hydroxide-activated charcoal 、 氨 、 水 、 氢气 、 sodium 、 sodium hydride 、 sodium carbonate 、 三乙胺 、 三氟乙酸 、 lithium hydroxide 作用下， 以 四氢呋喃 、 1,4-二氧六环 、 甲醇 、 乙二醇二甲醚 、 二氯甲烷 、 水 、 N,N-二甲基甲酰胺 、 乙腈 、 mineral oil 为溶剂， -70.0~20.0 ℃ 、500.01 kPa 条件下， 反应 103.75h， 生成 2(R)-(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)-3-(1H-indole-3-yl)propanoic acid, α-(aminomethyl)-
  参考文献：
  名称：

  Synthesis and Evaluation of Analogues of N-Phthaloyl-l-tryptophan (RG108) as Inhibitors of DNA Methyltransferase 1

  摘要：

  DNA methyltransferases (DNMT) are promising drug targets in cancer provided that new, more specific, and chemically stable inhibitors are discovered. Among the non-nucleoside DNMT inhibitors, N-phthaloyl-L-tryptophan 1 (RG108) was first identified as inhibitor of DNMT1. Here, 1 analogues were synthesized to understand its interaction with DNMT. The indole, carboxylate, and phthalimide moieties were modified. Homologated and conformationally constrained analogues were prepared. The latter were synthesized from prolinohomotryptophan derivatives through a methodology based amino-zinc-ene-enolate cyclization. All compounds were tested for their ability to inhibit DNMT1 in vitro. Among them, constrained compounds 16-18 and NPys derivatives 10-11 were found to be at least 10-fold more potent than the reference compound. The cytotoxicity on the tumor, DU145 cell line of the most potent inhibitors was correlated to their inhibitory potency. Finally, docking studies were conducted in order to understand their binding mode. This study provides insights for the design of the next-generation of DNMT inhibitors.

  DOI：

  10.1021/jm401419p