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千里光宁 | 130-01-8

中文名称
千里光宁
中文别名
千里光寧鹼
英文名称
senecoinine
英文别名
Senecionine;Senecionin;(1R,4Z,6R,7R,17R)-4-ethylidene-7-hydroxy-6,7-dimethyl-2,9-dioxa-14-azatricyclo[9.5.1.014,17]heptadec-11-ene-3,8-dione
千里光宁化学式
CAS
130-01-8
化学式
C18H25NO5
mdl
——
分子量
335.4
InChiKey
HKODIGSRFALUTA-JTLQZVBZSA-N
BEILSTEIN
——
EINECS
——
  • 物化性质
  • 计算性质
  • ADMET
  • 安全信息
  • SDS
  • 制备方法与用途
  • 上下游信息
  • 反应信息
  • 文献信息
  • 表征谱图
  • 同类化合物
  • 相关功能分类
  • 相关结构分类

物化性质

  • 熔点:
    236 °C(lit.)
  • 比旋光度:
    D25 -55.1° (c = 0.034 in chloroform)
  • 沸点:
    472.03°C (rough estimate)
  • 密度:
    1.266 g/cm3
  • 溶解度:
    DMF:5mg/mL; DMSO:2mg/mL;乙醇:1mg/mL; PBS(pH 7.2):0.1 mg/mL
  • LogP:
    0.880 (est)
  • 颜色/状态:
    Plates
  • 味道:
    Bitter
  • 蒸汽压力:
    1.8X10-12 mm Hg @ 25 °C /Estimated/
  • 稳定性/保质期:
    Stability: stable at room temperature in closed containers: best stored under nitrogen -15 °C.
  • 旋光度:
    Specific optical rotation: -55.1 deg @ 25 °C/D (C= 0.034 in chloroform)
  • 分解:
    When heated to decomposition it emits toxic fumes of /nitrogen oxides/.
  • 解离常数:
    pKa = 5.92 /Estimated/

计算性质

  • 辛醇/水分配系数(LogP):
    1.1
  • 重原子数:
    24
  • 可旋转键数:
    0
  • 环数:
    3.0
  • sp3杂化的碳原子比例:
    0.67
  • 拓扑面积:
    76.1
  • 氢给体数:
    1
  • 氢受体数:
    6

ADMET

代谢
使用来自苯巴比妥预处理雄性大鼠肝脏的微体,检测到的吡咯烷生物碱被代谢为N-氧化物和吡咯。
Using microsomes from livers of phenobarbitone-pretreated male rats, pyrrolizidine alkaloids tested were metabolized to n-oxides and pyrroles.
来源:Hazardous Substances Data Bank (HSDB)
代谢
体外小鼠肝脏微粒体对大环吡咯烷生物碱千里光碱的代谢进行了研究。从BALB/c小鼠的微粒体酶系统中分离出了千里酸、千里光碱N-氧化物和一种新的代谢物,19-羟基千里光碱。
The in vitro mouse hepatic microsomal metabolism of the macrocyclic pyrrolizidine alkaloid senecionine was studied. Senecic acid, senecionine n-oxide and 19-hydroxysenecionine, a new metabolite, were isolated from the microsomal enzyme system of balb/c mice.
来源:Hazardous Substances Data Bank (HSDB)
代谢
有毒的吡咯烷生物碱,例如千里光碱,是环状的芳香胺,它们通过细胞色素P450(CYP3A4)脱氢生成相应的吡咯。吡咯本身是亲核试剂,但是通过吡咯烷环上取代基的丢失可以生成亲电试剂...
The toxic pyrrolizidine alkaloids, such as senecionine, are cyclic arylamines that are dehydrogenated by cytochrome P450 (CYP3A4) to the corresponding pyrroles. Pyrroles themselves are nucleophiles, but electrophiles are generated through the loss of substituents on the pyrrolizidine nucleus... .
来源:Hazardous Substances Data Bank (HSDB)
代谢
在动物中,吡咯烷生物碱的主要代谢途径是:(a) 酯基的水解;(b) N-氧化;和(c) 吡咯烷环的脱氢生成吡咯衍生物。途径(a)和(b)被认为是解毒机制。途径(c)导致有毒代谢物。途径(a)发生在肝脏和血液中;途径(b)和(c)是通过微粒体混合功能氧化酶系统在肝脏中产生的。/吡咯烷生物碱/
In animals, the major metabolic routes of pyrrolizidine alkaloids are: (a) hydrolysis of the ester groups; (b) N-oxidation; and (c) dehydrogenation of the pyrrolizidine nucleus to pyrrolic derivatives. Routes (a) and (b) are believed to be detoxification mechanisms. Route (c) leads to toxic metabolites. Route (a) occurs in liver and blood; routes (b) and (c) are brought about in the liver by the microsomal mixed function oxidase system. /pyrrolizidine alkaloids/
来源:Hazardous Substances Data Bank (HSDB)
毒理性
  • 毒性总结
千里光碱被归类为一种吡咯烷生物碱(PA)。不饱和的吡咯烷生物碱对肝脏有毒,即对肝脏有害。PAs 还会导致肝静脉闭塞性疾病和肝癌。PAs 是致肿瘤的。与 PAs 消费相关的疾病称为吡咯烷生物碱中毒。千里光碱已被证明能在分离的肝细胞中产生细胞质自由 Ca2+ 浓度的增加,这与细胞毒性的增加相关。在没有细胞外 Ca2+ 的情况下,细胞毒性大于其存在时,这表明细胞内 Ca2+ 分布的改变,而不是细胞外 Ca2+ 的流入,是导致千里光碱诱导的肝毒性的原因。千里光碱已被证明具有肝毒性、遗传毒性和细胞毒性。千里光碱已被证明能以剂量相关的方式在分离的大鼠肝细胞中产生膜脂质的过氧化。还研究了细胞内 Ca2+ 浓度的改变作为细胞毒性的可能的主要机制。大量研究已经揭示,千里光碱诱导的肝毒性与脂质过氧化、细胞内 Ca2+ 改变和细胞间谷胱甘肽耗竭有关。
Senecionine is classified as a pyrrolizidine alkaloid (PA). Unsaturated pyrrolizidine alkaloids are hepatotoxic, that is, damaging to the liver. PAs also cause hepatic veno-occlusive disease and liver cancer. PAs are tumorigenic. Disease associated with consumption of PAs is known as pyrrolizidine alkaloidosis. (Wikipedia) The pyrrolizidine alkaloid senecionine has been shown to produce an increase in cytosolic free Ca2+ concentration in isolated hepatocytes that correlated with an increase in cellular toxicity. The cytotoxicity was greater in the absence of extracellular Ca2+ than in its presence, suggesting that alterations in intracellular Ca2+ distribution, and not an influx of extracellular Ca2+, were responsible for the senecionine-induced hepatotoxicity. Senecionine has been shown to be hepatotoxic, genotoxic, and cytotoxic. Senecionine has been shown to produce peroxidation of membrane lipids in a dose-related manner in isolated rat hepatocytes. Alterations in intracellular Ca2+ concentration also were examined as a possible primary mechanism of cellular toxicity. (A15422) Substantial research has revealed that senecionine-induced hepatotoxicity is associated with lipid peroxidation, intracellular Ca2+ alteration, and intercellular glutathione depletion. (A15423)
来源:Toxin and Toxin Target Database (T3DB)
毒理性
  • 致癌物分类
对人类不具有致癌性(未被国际癌症研究机构IARC列名)。
No indication of carcinogenicity to humans (not listed by IARC).
来源:Toxin and Toxin Target Database (T3DB)
毒理性
  • 副作用
职业性肝毒素 - 第二性肝毒素:在职业环境中的毒性效应潜力是基于人类摄入或动物实验的中毒案例。
Occupational hepatotoxin - Secondary hepatotoxins: the potential for toxic effect in the occupational setting is based on cases of poisoning by human ingestion or animal experimentation.
来源:Haz-Map, Information on Hazardous Chemicals and Occupational Diseases
毒理性
  • 相互作用
我们纯化了三种来自苯巴比妥(PB)处理过的豚鼠肝脏的P450酶,以评估这些酶在吡咯烷生物碱(PA)代谢中的作用。豚鼠经PB处理后,肝微粒体将PA类中的千里光碱(SN)转化为活化的代谢产物吡咯代谢物(+/-)6,7-二氢-7-羟基-1-羟甲基-5H-吡咯里嗪(DHP)和解毒产物SN N-氧化物,分别增加了224%和70%。第二种纯化的豚鼠P450,一种2C型同种型(通过基质辅助激光解吸飞行时间质谱测定的M(r) = 56,496),以每分钟13.3次的速率将SN转化为SN N-氧化物,但对DHP的形成催化作用很小。第三种豚鼠P450,一种明显的3A型(通过SDS-PAGE测定的M(r) = 54-56,000),在最后的纯化过程中丧失了对SN的催化活性。
We have purified three P450s from the liver of the phenobarbital (PB)-treated guinea pig in order to evaluate the role of these enzymes in pyrrolizidine alkaloid (PA) metabolism. PB treatment of guinea pig increased the hepatic microsomal conversion of the PA senecionine (SN) to the pyrrolic metabolite (+/-)6,7-dihydro-7-hydroxy-1-hydroxymethyl-5H-pyrrolizine (DHP), an activation product, and SN N-oxide, a detoxification product by 224 and 70% respectively. ... . A second purified guinea pig P450, a 2C-type isoform (M(r) = 56,496 by MALDI-TOF mass spectrometry), produced SN N-oxide from SN at the rate of 13.3 min-1 but catalyzed little DHP formation. The third guinea pig P450, an apparent 3A type (M(r) = 54-56,000 by SDS-PAGE), lost its catalytic activity towards SN during the final purification process.
来源:Hazardous Substances Data Bank (HSDB)
毒理性
  • 解毒与急救
基本治疗:建立专利气道。如有必要,进行吸痰。观察呼吸不足的迹象,如有需要,协助通气。通过非循环呼吸面罩以10至15升/分钟的速度给予氧气。监测肺水肿,如有必要进行治疗……。监测休克,如有必要进行治疗……。预见并处理癫痫发作……。对于眼睛污染,立即用水冲洗眼睛。在运输过程中,用生理盐水连续冲洗每只眼睛……。不要使用催吐剂。对于摄入,如果患者能吞咽、有强烈的干呕反射且不流口水,则用水冲洗口腔,并给予5毫升/千克,最多200毫升的水进行稀释……。在去污后,用干燥的无菌敷料覆盖皮肤烧伤……。/毒药A和B/
Basic treatment: Establish a patent airway. Suction if necessary. Watch for signs of respiratory insufficiency and assist ventilations if needed. Administer oxygen by nonrebreather mask at 10 to 15 L/min. Monitor for pulmonary edema and treat if necessary ... . Monitor for shock and treat if necessary ... . Anticipate seizures and treat if necessary ... . For eye contamination, flush eyes immediately with water. Irrigate each eye continuously with normal saline during transport ... . Do not use emetics. For ingestion, rinse mouth and administer 5 ml/kg up to 200 ml of water for dilution if the patient can swallow, has a strong gag reflex, and does not drool ... . Cover skin burns with dry sterile dressings after decontamination ... . /Poison A and B/
来源:Hazardous Substances Data Bank (HSDB)
吸收、分配和排泄
在动物研究中,最高浓度发现于肝脏、肺、肾脏和脾脏。/吡咯烷生物碱/
In animal studies highest concentrations were found in the liver, lungs, kidneys and spleen. /pyrrolizidine alkaloids/
来源:Hazardous Substances Data Bank (HSDB)
吸收、分配和排泄
给予0.1 LD50剂量的大鼠体内senaline的血液水平被测定。在注射后0.5、1和2小时,水平分别为0.38、0.32和0.14毫克/升。
Blood levels of senecionine in rats given 0.1 LD50 ip were determined. The levels were 0.38, 0.32, and 0.14 mg/litre at 0.5, 1, and 2 h after injection, respectively.
来源:Hazardous Substances Data Bank (HSDB)
吸收、分配和排泄
...Senecionine... /was/ 研究了关于分布、排泄、转移入乳汁以及在 BALB/c 小鼠肝脏大分子上的共价结合。注射后,放射性物质在16小时内迅速通过尿液和粪便排泄(84%或更多)。16小时时,肝脏含有超过1.5%的剂量。在16小时内,有很小一部分,即0.04%的剂量转移到了乳汁中;大部分放射性物质发现在脱脂乳部分,这表明PA(可能是某种化合物或药物)以水溶性代谢物的形式转移到了乳汁中。...对牛胸腺DNA和微粒体大分子的结合在体外进行了测量。在没有O2或NADPH生成系统的情况下,或者通过煮沸微粒体,结合会减少。
...Senecionine... /was/ studied regarding the distribution, excretion, transfer into milk, and covalent binding to hepatic macromolecules in BALB/c mice. After injection, radioactivity was rapidly excreted in the urine and feces (84% or greater) within 16 hr. The liver contained over 1.5% of the dose at 16 hr. A small amount, 0.04%, of the dose was transferred into the milk in 16 hr; the majority of radioactivity was found in the skim-milk fraction, suggesting that the PA's were transferred to the milk as water-soluble metabolites. ...The binding to calf thymus DNA and microsomal macromolecules was measured in vitro. The binding was diminished in the absence of O2 or a NADPH-generating system or by boiling the microsomes.
来源:Hazardous Substances Data Bank (HSDB)
吸收、分配和排泄
...在静脉给药[14C]SEN(60毫克/千克,10微居里/千克)后,在7小时内收集了胆汁、尿液和血液。在总给药放射性中,分别有44%和43%通过胆汁和尿液排出。使用质谱分析,确定了千里光碱N-氧化物(SENNOX)是胆汁(44%中的52%)和尿液(43%中的30%)中的主要代谢物。在总共7小时内,作为原型生物碱排出的不到5%在胆汁中,18%在尿液中。
...Following intravenous administration of [14C]SEN (60 mg/kg, 10 microCi/kg), bile, urine and blood were collected over a 7-hr period. Of the total administered radioactivity, 44% and 43% were excreted in the bile and urine, respectively. Using mass spectroscopy, senecionine N-oxide (SENNOX) was identified as the major metabolite in bile (52% of 44%) and urine (30% of 43%). For the total 7 hr, <5% in bile and 18% in urine was excreted as parent alkaloid.
来源:Hazardous Substances Data Bank (HSDB)

安全信息

  • 危险等级:
    6.1(a)
  • 危险品标志:
    T
  • 安全说明:
    S45
  • 危险类别码:
    R25
  • WGK Germany:
    3
  • 危险品运输编号:
    UN 2811 6.1/PG 3
  • RTECS号:
    VT5710000
  • 包装等级:
    II
  • 危险类别:
    6.1(a)

SDS

SDS:d0e6eac9df20b8939e5c1ed0bf21b492
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制备方法与用途

生物活性

Senecionine(12-羟基-吡咯里西啶生物碱,Senecionan-11,16-二酮)是从欧洲千里光(Senecio vulgaris L.)中分离出的一种吡咯里西啶生物碱。Senecionine对动物和人类具有毒性。

体外研究

吡咯里西啶生物碱(PAs)被认为是植物源中最具肝毒性的化合物之一,存在于约3%的世界开花植物中。大多数PAs通过食用含有PA或PA污染的产品如牛奶、蜂蜜、草药茶及药物等对家畜和人类构成健康威胁。

体内研究

Senecionine与Adonifoline经静脉注射和口服给药后,观察到明显的药代动力学差异:两者吸收迅速但生物利用度较低,并快速代谢为PA N-氧化物或PAs及其N-氧化物的羟基化产物。Senecionine未能刺激环氧水合酶,反而减弱了谷胱甘肽-S-转移酶、对氨基苯甲酸甲基化酶及AHH的活性。在第12天后每周注射三次Senecionine,在七只大鼠中有三只提前分娩,且所有幼崽均为死产或出生后不久死亡。

化学性质

Senecionine为白色结晶粉末,可溶于甲醇、乙醇及DMSO等有机溶剂。来源于多种千里光属植物如菊三七(Senecio scandens Buch.-Ham. ex D. Don)、欧洲千里光(S. vulgaris L.)全草、菊叶千里光(S. chrysanthemoides DC.)根及牙克贝千里光(S. jacobaea L.)。

用途

千里光宁具有凝血止血、消炎和抗病毒的作用。主要用于含量测定/鉴定/药理实验等。

类别

有毒物品

毒性分级

高毒

急性毒性
  • 腹腔注射大鼠:LD50 > 33毫克/公斤
  • 静脉注射小鼠:LD50 = 64毫克/公斤
可燃性危险特性

可燃;燃烧时产生有毒氮氧化物烟雾

储运特性

通风低温干燥;与库房食品原料分开存放

灭火剂

干粉、泡沫、沙土、二氧化碳、雾状水

上下游信息

  • 下游产品
    中文名称 英文名称 CAS号 化学式 分子量

反应信息

  • 作为反应物:
    描述:
    千里光宁双氧水 作用下, 生成 千里光宁氧化物
    参考文献:
    名称:
    特征离子簇是使用HPLC-MS分析鉴定含吡咯烷核生物碱的天然产物中吡咯烷核生物碱N-氧化物的决定因素。
    摘要:
    含吡咯烷核生物碱(PA)的植物在世界范围内分布广泛。PA具有肝毒性,影响牲畜和人类。PA N氧化物通常与PA一起存在于植物中,还具有肝毒性,但效力较低。HPLC-MS通常用于分析含PA的草药,尽管在大多数情况下不提供PA参考。但是,迄今为止,没有参考标准,HPLC-MS方法无法将PA N-氧化物与PA区别开来,因为它们在质谱图中都会产生相同的特征离子。在本研究中,使用HPLC-MS系统研究了10种PA N-氧化物和相应PA的质谱,以定义对PAs和PA N-氧化物特有的特征质量碎片离子。有毒逆转录酶型PA N氧化物的质谱在m / z 118-120和136-138处显示两个特征性离子簇。这些离子簇是通过PA N-氧化物的三个独特的断裂途径产生的,并且在其相应的PA中未发现。类似地,无毒的platynecine型PA N氧化物也通过三种相似的途径断裂,从而在m / z 120-122和138-
    DOI:
    10.1002/jms.2969
点击查看最新优质反应信息

文献信息

  • NEW USE FOR A COMPOUND AS A MATRIX IN THE SPECIFIC DETECTION, IDENTIFICATION AND/OR QUANTIFICATION OF ALKALOIDS BY MALDI-TOF MASS SPECTROMETRY
    申请人:Dias Marylène
    公开号:US20140319331A1
    公开(公告)日:2014-10-30
    There is provided (i) a method of analysing small molecules that may have a mass of <800 Da, in particular alkaloids, said method being generally referred to as MALDI-TOF-MS (or MALDI time-of-flight mass spectrometry), which is an acronym for a method of analysis by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry. Also provided is (ii) a molecule according to formula (I) and the use of the molecule as a matrix in the analysis method.
    提供了一种分析可能具有质量小于800 Da的小分子的方法,特别是生物碱,该方法通常被称为MALDI-TOF-MS(或MALDI飞行时间质谱),这是一种通过基质辅助激光解吸/电离飞行时间质谱分析的方法的首字母缩写。还提供了一种根据式(I)的分子以及将该分子用作分析方法中的基质的用途。
  • Method And Assay Kit For Detection Of Toxicity Induced By Pyrrolizidine Alkaloids
    申请人:Lin Ge
    公开号:US20130189710A1
    公开(公告)日:2013-07-25
    An antibody, which specifically recognizes adducts between pyrrole and cellular macromolecules. Such adducts are likely to occur in mammals suffering an incident of pyrrolizidine alkaloid poisoning. The antibody can be produced using a synthetic immunogen conjugated with a pyrrole as a hapten and it can be used, for example in an assay kit and/or by itself, as a novel means for detecting or diagnosing pyrrolizidine alkaloid poisoning both clinics and research laboratories.
    一种抗体,特异性识别吡咯与细胞大分子之间的加合物。这种加合物很可能在哺乳动物遭受吡咯啉生物碱中毒事件时发生。该抗体可以使用与吡咯偶联的合成免疫原作为半抗原来生产,并且可以用作检测或诊断吡咯啉生物碱中毒的新方法,例如在检测试剂盒和/或单独使用,无论是在临床还是研究实验室中。
  • Species differences in the hepatic microsomal enzyme metabolism of the pyrrolizidine alkaloids
    作者:Jian-Ya Huan、Cristobal L Miranda、Donald R Buhler、Peter R Cheeke
    DOI:10.1016/s0378-4274(98)00152-0
    日期:1998.10
    cytochrome P450s and flavin-containing monooxygenases (FMO) in bioactivation and detoxification of pyrrolizidine alkaloids (PA) were studied in vitro using sheep and hamster hepatic microsomes. Chemical and immunochemical inhibition data suggested that the conversion of SN to DHP is catalyzed mainly by cytochrome P450s (68-82%), whereas the formation of SN N-oxide is carried out largely by FMO (55-71%)
    在体外测量了八种动物(绵羊、牛、沙鼠、兔子、仓鼠、日本鹌鹑、鸡、大鼠)的吡咯代谢物和 senecionine (SN) N-氧化物形成的物种差异,这些动物对吡咯里西啶生物碱 (PA) 中毒的易感性不同通过肝微粒体孵化。结果表明,吡咯代谢物的产生与动物对 PA 毒性的易感性之间没有很强的相关性。通过 (+/-)6,7-dihydro-7-hydroxy-1-hydroxymethyl-5H-pyrrolizine (DHP) 的形成测量,仓鼠(一种抗性物种)中 PA 的活化速率远远超过 SN N-氧化物的速率形成(解毒)(DHP/N-氧化物 = 2.29)。相比之下,SN N-氧化物是绵羊的主要代谢物,绵羊是另一种抗性物种,DHP 的产量要低得多(DHP/N-氧化物 = 0.26)。使用绵羊和仓鼠肝微粒体在体外研究了细胞色素 P450 和含黄素的单加氧酶 (FMO) 在吡咯里西啶生物碱 (PA)
  • Identification of the UDP-Glucuronosyltransferase Isozyme Involved in Senecionine Glucuronidation in Human Liver Microsomes
    作者:Yu-Qi He、Yong Liu、Bin-Feng Zhang、Hui-Xin Liu、Yan-Liu Lu、Li Yang、Ai-zhen Xiong、Ling-Ling Xu、Chang-Hong Wang、Ling Yang、Zheng-Tao Wang
    DOI:10.1124/dmd.109.030460
    日期:2010.4
    Senecionine (SEN) is a representative of the hepatotoxic pyrrolizidine alkaloids. Although phase I metabolism for cytochrome P450-mediated metabolic activation of SEN was investigated extensively, phase II metabolism for glucuronidation of this compound has not been investigated until now. In our present study, one unique glucuronidation product of SEN in human liver microsomes (HLMs) was identified as SEN N -glucuronide using an authentically synthesized product for which the structure was identified via 1H and 13C NMR analysis. Subsequently, kinetics indicated that SEN N -glucuronidation followed the typical Michaelis-Menten model and only one major isozyme participated in it. Finally, this isozyme was demonstrated to be UDP-glucuronosyltransferase (UGT) 1A4, with the direct evidence that recombinant UGT1A4 exhibited predominant and exclusive activity on SEN N -glucuronidation. This result was confirmed by other experiments including chemical inhibition by selective inhibitors and a correlation study between activities of SEN N -glucuronidation and various UGT isozymes. The exclusive role of UGT1A4 on SEN N -glucuronidation was strengthened additionally by its inhibitory kinetic study in which the selective inhibitor of UGT1A4 showed a similar inhibition pattern and K i values in both HLM and recombinant UGT1A4 systems. Because UGT2B10 activity failed to correlate with SEN N -glucuronidation in HLMs from 10 individuals, it was impossible for UGT2B10 to play an important role in this metabolism.
    千里光碱(SEN)是肝毒性吡咯烷生物碱的代表。尽管对细胞色素P450介导的SEN代谢活化的第一阶段代谢进行了广泛研究,但直到现在,对这种化合物的葡萄糖醛酸化第二阶段代谢尚未进行研究。在我们目前的研究中,使用通过1H和13C NMR分析确定结构的真正合成产物,在人类肝微粒体(HLM)中鉴定出SEN的一种独特的葡萄糖醛酸化产物SEN N-葡萄糖醛酸苷。随后,动力学表明SEN N-葡萄糖醛酸化遵循典型的Michaelis-Menten模型,并且只有一个主要同工酶参与其中。最后,证明这种同工酶是UDP-葡萄糖醛酸转移酶(UGT)1A4,有直接证据表明重组UGT1A4对SEN N-葡萄糖醛酸化表现出主要和专一活性。这一结果得到了其他实验的证实,包括选择性抑制剂的化学抑制以及SEN N-葡萄糖醛酸化活性与各种UGT同工酶之间的相关性研究。UGT1A4对SEN N-葡萄糖醛酸化具有专一作用,这一点通过其抑制动力学研究得到了进一步证实,其中UGT1A4的选择性抑制剂在HLM和重组UGT1A4系统中表现出相似的抑制模式和Ki值。由于UGT2B10活性与10个人的HLM中的SEN N-葡萄糖醛酸化不相关,因此UGT
  • METHOD FOR PREDICTING ACTIVATION ENERGY USING AN ATOMIC FINGERPRINT DESCRIPTOR OR AN ATOMIC DESCRIPTOR
    申请人:Bioinformatics&Molecular Design Research Center
    公开号:EP2354987A2
    公开(公告)日:2011-08-10
    The present invention provides a method for constructing a database of atomic fingerprint descriptors. The invention provides a method for predicting activation energy using an atomic fingerprint descriptor and an atomic descriptor, the method comprising the steps of: (i) calculating the atomic fingerprint descriptor of a substrate; (ii) comparing the calculated atomic fingerprint descriptor with the constructed atomic fingerprint descriptor database to select an atomic position where cytochrome P450-mediated metabolism occurs; and (iii) predicting activation energy for the selected atomic position using an atomic descriptor. Also, the invention provides a method of predicting the activation energy of CYP450-mediated phase I metabolism using effective atomic descriptors. Specifically, the invention provides a method of predicting the activation energy either for cytochrome P450-mediated hydrogen abstraction or for tetrahedral intermediate formation in cytochrome P450-aromatic hydroxylation using equations including effective atomic descriptors. The method of the invention can rapidly predict activation energy for phase I metabolites at a practical level without having to perform a docking experiment between any additional CYP450 and the substrate, or a quantum mechanical calculation, thereby making it easier to develop new drugs using a computer. Also, the present invention may propose a strategy for increasing the bioavailability of drugs through the avoidance of metabolites based on the possibility of drug metabolism. Furthermore, the method of the present invention proposes new empirical approaches which can also be easily applied to activation energies for various chemical reactions, and makes it possible to explain physical and chemical factors that determine activation energy. In addition, through the prediction of activation energy according to the present invention, it is possible to predict i) metabolic products, ii) the relative rate of metabolism, iii) metabolic regioselectivity, iv) metabolic inhibition, v) drug-drug interactions, and vi) the toxicity of a metabolite.
    本发明提供了一种构建原子指纹描述符数据库的方法。本发明提供了一种使用原子指纹描述符和原子描述符预测活化能的方法,该方法包括以下步骤:(i) 计算底物的原子指纹描述符;(ii) 将计算的原子指纹描述符与构建的原子指纹描述符数据库进行比较,以选择细胞色素 P450 介导的代谢发生的原子位置;以及 (iii) 使用原子描述符预测所选原子位置的活化能。此外,本发明还提供了一种利用有效原子描述符预测 CYP450 介导的 I 期代谢活化能的方法。具体来说,本发明提供了一种利用包括有效原子描述符的方程预测细胞色素 P450 介导的氢抽取活化能或细胞色素 P450 芳烃羟化四面体中间体形成活化能的方法。本发明的方法可以在实用水平上快速预测 I 期代谢物的活化能,而无需在任何额外的 CYP450 和底物之间进行对接实验,也无需进行量子力学计算,从而使使用计算机开发新药物变得更加容易。同时,本发明还可以根据药物代谢的可能性,提出一种通过避免代谢物来提高药物生物利用度的策略。此外,本发明的方法提出了新的经验方法,也可以很容易地应用于各种化学反应的活化能,并使解释决定活化能的物理和化学因素成为可能。此外,根据本发明预测活化能,还可以预测 i) 代谢产物;ii) 代谢的相对速率;iii) 代谢的区域选择性;iv) 代谢抑制;v) 药物与药物之间的相互作用;以及 vi) 代谢产物的毒性。
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