10,28,45-Trioxa-1,4,16,19,22,34,39,51-octazaoctacyclo[17.17.17.26,9.211,14.224,27.229,32.241,44.246,49]pentahexaconta-6,8,11,13,24(61),25,27(60),29(59),30,32(58),41,43,46,48,54,56,62,64-octadecaene | 1257883-42-3

• 分子结构分类: 有机化合物 - 有机氧化合物
• 英文名称: 10,28,45-Trioxa-1,4,16,19,22,34,39,51-octazaoctacyclo[17.17.17.26,9.211,14.224,27.229,32.241,44.246,49]pentahexaconta-6,8,11,13,24(61),25,27(60),29(59),30,32(58),41,43,46,48,54,56,62,64-octadecaene
• 英文别名: 10,28,45-trioxa-1,4,16,19,22,34,39,51-octazaoctacyclo[17.17.17.26,9.211,14.224,27.229,32.241,44.246,49]pentahexaconta-6,8,11,13,24(61),25,27(60),29(59),30,32(58),41,43,46,48,54,56,62,64-octadecaene
• CAS: 1257883-42-3
• 化学式: C₅₄H₆₆N₈O₃
• 分子量: 875.17
• InChiKey: MWYHALUNPIHRHH-UHFFFAOYSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  5.7
• 重原子数：
  65
• 可旋转键数：
  0
• 环数：
  33.0
• sp3杂化的碳原子比例：
  0.33
• 拓扑面积：
  106
• 氢给体数：
  6
• 氢受体数：
  11

反应信息

• 作为反应物：
  描述：

  10,28,45-Trioxa-1,4,16,19,22,34,39,51-octazaoctacyclo[17.17.17.26,9.211,14.224,27.229,32.241,44.246,49]pentahexaconta-6,8,11,13,24(61),25,27(60),29(59),30,32(58),41,43,46,48,54,56,62,64-octadecaene 在 氢溴酸 作用下， 以33 mmol的产率得到
  参考文献：
  名称：

  Evaluation of the binding ability of a macrobicyclic receptor for anions by potentiometry and molecular dynamics simulations in solution

  摘要：

  The macrobicycle derived from bis-tren and containing diphenoxy groups as spacers, L-1, was synthesized and used as receptor for anions. The binding ability of the new receptor for some aromatic carboxylates [phthalate (ph(2-)), isophthalate (iph(2-)), terephthalate (tph(2-)), benezenetricarboxylate (btc(3-)), and the herbicide 4-amino-3,5,6-trichloro-2-pyridinecarboxylate (ATCP(-))], and the aliphatic cyclohexanetricarboxylate (ch(3-)) anions was evaluated by potentiometric measurements and molecular dynamic simulation in solution. The association constants were determined by potentiometry in H2O/MeOH (1:1 v/v) at 298.2 K and 0.10 mol dm(-3) in KCl. The strongest association was found with btc(3-) anion and the effective binding constants at pH 5.5 follow the order: btc(3-)>tph(2-)>ph(2-) approximate to iph(2-)>ch(3-) approximate to ATCP(-). Molecular dynamics simulations carried out for the associations of (H6L1)(6+) with btc(3-), tph(2-) and iph(2-) in the same mixture of solvents indicated that these anions interact with the receptor by a combination of electrostatic and multiple N-H center dot center dot center dot O=C hydrogen bond interactions. It was also verified that in the recognition process the tph(2-) remained encapsulated over the entire time of simulation while the btc(3-) is partially inserted into the receptor cavity with one carboxylate group largely exposed to water solvent molecules, and iph(2-) anion exhibited an intermediate binding behaviour. The free energy difference between btc(3-) and iph(2-) associations estimated by free energy calculations is in excellent agreement with the difference found from the experimental values for the corresponding association constants, which indicates that the unconstrained molecular dynamics simulations carried out with these two anions are realistic pictures of their molecular recognition processes. (C) 2010 Elsevier Ltd. All rights reserved.

  DOI：

  10.1016/j.tet.2010.09.006
• 作为产物：
  描述：

  三(2-氨基乙基)胺 、 4-(4-甲酰基苯氧基)苯甲醛 在 sodium tetrahydroborate 作用下， 以 乙腈 、 乙醇 为溶剂， 反应 6.0h， 生成 10,28,45-Trioxa-1,4,16,19,22,34,39,51-octazaoctacyclo[17.17.17.26,9.211,14.224,27.229,32.241,44.246,49]pentahexaconta-6,8,11,13,24(61),25,27(60),29(59),30,32(58),41,43,46,48,54,56,62,64-octadecaene
  参考文献：
  名称：

  Evaluation of the binding ability of a macrobicyclic receptor for anions by potentiometry and molecular dynamics simulations in solution

  摘要：

  The macrobicycle derived from bis-tren and containing diphenoxy groups as spacers, L-1, was synthesized and used as receptor for anions. The binding ability of the new receptor for some aromatic carboxylates [phthalate (ph(2-)), isophthalate (iph(2-)), terephthalate (tph(2-)), benezenetricarboxylate (btc(3-)), and the herbicide 4-amino-3,5,6-trichloro-2-pyridinecarboxylate (ATCP(-))], and the aliphatic cyclohexanetricarboxylate (ch(3-)) anions was evaluated by potentiometric measurements and molecular dynamic simulation in solution. The association constants were determined by potentiometry in H2O/MeOH (1:1 v/v) at 298.2 K and 0.10 mol dm(-3) in KCl. The strongest association was found with btc(3-) anion and the effective binding constants at pH 5.5 follow the order: btc(3-)>tph(2-)>ph(2-) approximate to iph(2-)>ch(3-) approximate to ATCP(-). Molecular dynamics simulations carried out for the associations of (H6L1)(6+) with btc(3-), tph(2-) and iph(2-) in the same mixture of solvents indicated that these anions interact with the receptor by a combination of electrostatic and multiple N-H center dot center dot center dot O=C hydrogen bond interactions. It was also verified that in the recognition process the tph(2-) remained encapsulated over the entire time of simulation while the btc(3-) is partially inserted into the receptor cavity with one carboxylate group largely exposed to water solvent molecules, and iph(2-) anion exhibited an intermediate binding behaviour. The free energy difference between btc(3-) and iph(2-) associations estimated by free energy calculations is in excellent agreement with the difference found from the experimental values for the corresponding association constants, which indicates that the unconstrained molecular dynamics simulations carried out with these two anions are realistic pictures of their molecular recognition processes. (C) 2010 Elsevier Ltd. All rights reserved.

  DOI：

  10.1016/j.tet.2010.09.006

文献信息

• Evaluation of the binding ability of a macrobicyclic receptor for anions by potentiometry and molecular dynamics simulations in solution
  作者：Sílvia Carvalho、Rita Delgado、Vítor Félix

  DOI：10.1016/j.tet.2010.09.006

  日期：2010.11

  The macrobicycle derived from bis-tren and containing diphenoxy groups as spacers, L-1, was synthesized and used as receptor for anions. The binding ability of the new receptor for some aromatic carboxylates [phthalate (ph(2-)), isophthalate (iph(2-)), terephthalate (tph(2-)), benezenetricarboxylate (btc(3-)), and the herbicide 4-amino-3,5,6-trichloro-2-pyridinecarboxylate (ATCP(-))], and the aliphatic cyclohexanetricarboxylate (ch(3-)) anions was evaluated by potentiometric measurements and molecular dynamic simulation in solution. The association constants were determined by potentiometry in H2O/MeOH (1:1 v/v) at 298.2 K and 0.10 mol dm(-3) in KCl. The strongest association was found with btc(3-) anion and the effective binding constants at pH 5.5 follow the order: btc(3-)>tph(2-)>ph(2-) approximate to iph(2-)>ch(3-) approximate to ATCP(-). Molecular dynamics simulations carried out for the associations of (H6L1)(6+) with btc(3-), tph(2-) and iph(2-) in the same mixture of solvents indicated that these anions interact with the receptor by a combination of electrostatic and multiple N-H center dot center dot center dot O=C hydrogen bond interactions. It was also verified that in the recognition process the tph(2-) remained encapsulated over the entire time of simulation while the btc(3-) is partially inserted into the receptor cavity with one carboxylate group largely exposed to water solvent molecules, and iph(2-) anion exhibited an intermediate binding behaviour. The free energy difference between btc(3-) and iph(2-) associations estimated by free energy calculations is in excellent agreement with the difference found from the experimental values for the corresponding association constants, which indicates that the unconstrained molecular dynamics simulations carried out with these two anions are realistic pictures of their molecular recognition processes. (C) 2010 Elsevier Ltd. All rights reserved.