The invention includes a method of assaying phylogenetically related sequences and generating a set of possible nucleic acid or amino acid sequence combinations. Sequences are analyzed to create an alignment and a set of phylogenetically related sequences are selected. The observed residue(s) or indel(s) occupying each position in the alignment of the selected phylogenetically related sequences are identified and this information is used to generate a set of sequence combinations, wherein the set of possible sequence combinations (nucleic acid or polypeptide) is composed of the union of the observed residues or indels identified at each position.
本发明包括一种检测系统发育相关序列并生成一组可能的核酸或
氨基酸序列组合的方法。分析序列以创建比对,并选择一组系统发育相关的序列。在所选系统发育相关序列的比对中,确定占据每个位置的观察到的残基或
吲哚,并利用这些信息生成一组序列组合,其中一组可能的序列组合(核酸或
多肽)由每个位置上确定的观察到的残基或
吲哚的联合组成。