2-fluoro-N-(3-hydroxyphenyl)benzamide

• 分子结构分类: 有机化合物 - 苯类化合物 - 苯和取代衍生物
• 英文名称: 2-fluoro-N-(3-hydroxyphenyl)benzamide
• 化学式: C₁₃H₁₀FNO₂
• mdl: MFCD00444980
• 分子量: 231.22
• InChiKey: GMTKRBXGJLIBHH-UHFFFAOYSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  2.8
• 重原子数：
  17
• 可旋转键数：
  2
• 环数：
  2.0
• sp3杂化的碳原子比例：
  0.0
• 拓扑面积：
  49.3
• 氢给体数：
  2
• 氢受体数：
  3

文献信息

• 4,7-dichlororhodamine dyes labeled polynucleotides
  申请人：Lee G. Linda

  公开号：US20050112781A1

  公开（公告）日：2005-05-26

  A set of 4,7-dichlororhodamine compounds useful as fluorescent dyes are disclosed having the structures wherein R 1 -R 6 are hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group, or, when taken together, R 1 and R 6 is benzo, or, when taken together, R 4 and R 5 is benzo; R 7 -R 10 , R 12 -R 16 and R 18 may be hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group; R 11 and R 17 may be hydrogen, lower alkyl, lower alkene, lower alkyne, phenyl, aryl, linking group; Y 1 -Y 4 are hydrogen, lower alkyl, or cycloalkyl, or, when taken together, Y 1 and R 2 , Y 2 and R 1 Y 3 and R 3 , and/or Y 4 and R 4 is propano, ethano, or substituted forms thereof, and X 1 -X 3 taken separately are hydrogen, chlorine, fluorine, lower alkyl, carboxylate, sulfonate, hydroxymethyl, and linking group, or any combinations thereof. In another aspect, the invention includes reagents labeled with the 4,7-dichlororhodamine dye compounds, including deoxynucleotides, dideoxynucleotides, and polynucleotides. In an additional aspect, the invention includes methods utilizing such dye compounds and reagents including dideoxy polynucleotide sequencing and fragment analysis methods.

  本文披露了一组4,7-二氯罗丹明化合物的结构，可用作荧光染料，其中R1-R6为氢、氟、氯、较低烷基、较低烯烃、较低炔烃、磺酸酯、砜、氨基、酰胺、腈、较低烷氧基、连接基或在一起时，R1和R6为苯并或在一起时，R4和R5为苯并；R7-R10、R12-R16和R18可以是氢、氟、氯、较低烷基、较低烯烃、较低炔烃、磺酸酯、砜、氨基、酰胺、腈、较低烷氧基、连接基；R11和R17可以是氢、较低烷基、较低烯烃、较低炔烃、苯基、芳基、连接基；Y1-Y4可以是氢、较低烷基或环烷基，或在一起时，Y1和R2、Y2和R1、Y3和R3和/或Y4和R4为丙烷、乙烷或其取代形式，而X1-X3单独取为氢、氯、氟、较低烷基、羧酸盐、磺酸盐、羟甲基和连接基，或任何组合。在另一个方面，本发明还包括用4,7-二氯罗丹明染料化合物标记的试剂，包括脱氧核苷酸、二脱氧核苷酸和多核苷酸。在另一个方面，本发明还包括利用这种染料化合物和试剂的方法，包括二脱氧多核苷酸测序和片段分析方法。
• 4,7-DICHLORORHODAMINE DYES
  申请人：Lee Linda G.

  公开号：US20090093623A1

  公开（公告）日：2009-04-09

  A set of 4,7-dichlororhodamine compounds useful as fluorescent dyes are disclosed having the structures wherein R 1 -R 6 are hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group, or, when taken together, R 1 and R 6 is benzo, or, when taken together, R 4 and R 5 is benzo; R 7 -R 10 , R 12 -R 16 and R 18 may be hydrogen, fluorine, chlorine, lower alkyl lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group; R 11 and R 17 may be hydrogen, lower alkyl lower alkene, lower alkyne, phenyl, aryl, linking group; Y 1 -Y 4 are hydrogen, lower alkyl or cycloalkyl, or, when taken together, Y 1 and R 2 , Y 2 and R 1 Y 3 and R 3 , and/or Y 4 and R 4 is propano, ethano, or substituted forms thereof, and X 1 -X 3 taken separately are hydrogen, chlorine, fluorine, lower alkyl, carboxylate, sulfonate, hydroxymethyl, and linking group, or any combinations thereof. In another aspect, the invention includes reagents labeled with the 4,7-dichlororhodamine dye compounds, including deoxynucleotides, dideoxynucleotides, and polynucleotides. In an additional aspect, the invention includes methods utilizing such dye compounds and reagents including dideoxy polynucleotide sequencing and fragment analysis methods.

  披露了一组有用的荧光染料的4,7-二氯罗丹明化合物，具有以下结构式，其中R1-R6是氢、氟、氯、低烷基、低烯烃、低炔烃、磺酸盐、磺酮、氨基、酰胺、腈、低烷氧基、连接基或当一起取时，R1和R6是苯并或当一起取时，R4和R5是苯并；R7-R10、R12-R16和R18可以是氢、氟、氯、低烷基、低烯烃、低炔烃、磺酸盐、磺酮、氨基、酰胺、腈、低烷氧基、连接基；R11和R17可以是氢、低烷基、低烯烃、低炔烃、苯基、芳基、连接基；Y1-Y4可以是氢、低烷基或环烷基，或当一起取时，Y1和R2、Y2和R1、Y3和R3、和/或Y4和R4是丙烷基、乙烷基或其取代形式，X1-X3分别取氢、氯、氟、低烷基、羧酸盐、磺酸盐、羟甲基和连接基或其任意组合。在另一个方面，本发明包括标记有4,7-二氯罗丹明染料化合物的试剂，包括脱氧核苷酸、二脱氧核苷酸和多核苷酸。在另一个方面，本发明包括利用这种染料化合物和试剂的方法，包括二脱氧多核苷酸测序和片段分析方法。
• 4,7-dichlororhodamine dyes useful as molecular probes
  申请人：Applera Corporation

  公开号：EP1386946A1

  公开（公告）日：2004-02-04

  A set of 4,7-dichlororhodamine compounds useful as fluorescent dyes are disclosed having the structures wherein R1-R6 are hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group, or, when taken together, R1 and R6 is benzo, or, when taken together, R4 and R5 is benzo; R7-R10, R12-R16 and R18 may be hydrogen, fluorine, chlorine, lower alkyl, lower alkene, lower alkyne, sulfonate, sulfone, amino, amido, nitrile, lower alkoxy, linking group; R11 and R17 may be hydrogen, lower alkyl, lower alkene, lower alkyne, phenyl, aryl, linking group; Y1-Y4 are hydrogen, lower alkyl, or cycloalkyl, or, when taken together, Y1 and R2, Y2 and R1 Y3 and R3, and/or Y4 and R4 is propano, ethano, or substituted forms thereof; and X1-X3 taken separately are hydrogen, chlorine, fluorine, lower alkyl, carboxylate, sulfonate, hydroxymethyl, and linking group, or any combinations thereof. In another aspect, the invention includes reagents labeled with the 4,7-dichlororhodamine dye compounds, including deoxynucleotides, dideoxynucleotides, and polynucleotides. In an additional aspect, the invention includes methods utilizing such dye compounds and reagents including dideoxy polynucleotide sequencing and fragment analysis methods.

  本发明公开了一组可用作荧光染料的 4,7-二氯多巴胺化合物，其结构如下 其中 R1-R6 为氢、氟、氯、低级烷基、低级烯基、低级炔基、磺酸基、砜基、氨基、酰胺基、腈基、低级烷氧基、连接基团，或当 R1 和 R6 合在一起时为苯并，或当 R4 和 R5 合在一起时为苯并；R7-R10、R12-R16 和 R18 可以是氢、氟、氯、低级烷基、低级烯基、低级炔基、磺酸盐、砜、氨基、酰胺、腈、低级烷氧基、连接基团；R11 和 R17 可以是氢、低级烷基、低级烯基、低级炔基、苯基、芳基、连接基团；Y1-Y4 是氢、低级烷基或环烷基，或 Y1 和 R2、Y2 和 R1、Y3 和 R3 和/或 Y4 和 R4 合在一起时是丙基、乙基或其取代形式；X1-X3 分别是氢、氯、氟、低级烷基、羧酸基、磺酸基、羟甲基和连接基团，或其任意组合。另一方面，本发明包括用 4,7-二氯罗丹明染料化合物标记的试剂，包括脱氧核苷酸、双脱氧核苷酸和多核苷酸。在另一个方面，本发明包括利用这种染料化合物和试剂的方法，包括双脱氧多核苷酸测序和片段分析方法。
• 4,7-DICHLORORHODAMINE DYES USEFUL AS MOLECULAR PROBES
  申请人：Applera Corporation

  公开号：EP1165694B1

  公开（公告）日：2004-09-22
• Method for analyzing the sequence of a nucleic acid using 4,7-dichlororhodamine dyes
  申请人：Applied Biosystems, LLC

  公开号：EP1386946B1

  公开（公告）日：2009-08-05