3-[[(2R,3S,5R)-2-[1-[[(2R,3S,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxymethyl]triazol-4-yl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile | 1443151-29-8

• 分子结构分类: 有机化合物 - 苯类化合物 - 三苯基化合物
• 英文名称: 3-[[(2R,3S,5R)-2-[1-[[(2R,3S,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxymethyl]triazol-4-yl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile
• CAS: 1443151-29-8
• 化学式: C₅₂H₆₂N₉O₁₂P
• 分子量: 1036.09
• InChiKey: RTWFRUAKNLMBQO-QLQDQQMXSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  4.4
• 重原子数：
  74
• 可旋转键数：
  22
• 环数：
  8.0
• sp3杂化的碳原子比例：
  0.44
• 拓扑面积：
  230
• 氢给体数：
  2
• 氢受体数：
  16

反应信息

• 作为产物：
  描述：

  5'-benzoylthymidine 在 四氮唑 、 copper(ll) sulfate pentahydrate 、 四丁基氟化铵 、 溴 、 乙酸酐 、 potassium carbonate 、 sodium ascorbate 作用下， 以 四氢呋喃 、 吡啶 、 甲醇 、 二氯甲烷 、 水 、 溶剂黄146 、 乙腈 为溶剂， 反应 107.17h， 生成 3-[[(2R,3S,5R)-2-[1-[[(2R,3S,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxymethyl]triazol-4-yl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile
  参考文献：
  名称：

  Synthesis of Triazole-Linked Oligonucleotides with High Affinity to DNA Complements and an Analysis of Their Compatibility with Biosystems

  摘要：

  New oligonucleotide analogues with triazole internucleotide linkages were synthesized, and their hybridization properties were studied. The analogues demonstrated DNA binding affinities similar to those of unmodified oligonucleotides. The modification was shown to protect the oligonucleotides from nuclease hydrolysis. The modified oligonucleotides were tested as PCR primers. Modifications remote from the 3'-terminus were tolerated by polymerases. Our results suggest that these new oligonucleotide analogues are among the most promising triazole DNA mimics characterized to date.

  DOI：

  10.1021/jo400651k

文献信息

• Synthesis of Triazole-Linked Oligonucleotides with High Affinity to DNA Complements and an Analysis of Their Compatibility with Biosystems
  作者：Anna M. Varizhuk、Dmitry N. Kaluzhny、Roman A. Novikov、Alexandr O. Chizhov、Igor P. Smirnov、Andrey N. Chuvilin、Olga N. Tatarinova、Gleb Y. Fisunov、Galina E. Pozmogova、Vladimir L. Florentiev

  DOI：10.1021/jo400651k

  日期：2013.6.21

  New oligonucleotide analogues with triazole internucleotide linkages were synthesized, and their hybridization properties were studied. The analogues demonstrated DNA binding affinities similar to those of unmodified oligonucleotides. The modification was shown to protect the oligonucleotides from nuclease hydrolysis. The modified oligonucleotides were tested as PCR primers. Modifications remote from the 3'-terminus were tolerated by polymerases. Our results suggest that these new oligonucleotide analogues are among the most promising triazole DNA mimics characterized to date.