In situ detection of nucleotide variants in high noise samples, and compositions and methods related thereto
申请人:Advanced Cell Diagnostics, Inc.
公开号:US11078528B2
公开(公告)日:2021-08-03
The invention relates to methods of in situ detection of a nucleic acid variation of a target nucleic acid in a sample, including single nucleotide variations, multi-nucleotide variations or splice sites. The method can comprise the steps of contacting the sample with a probe that detects the nucleic acid variation or splice site and a neighbor probe; contacting the sample with pre-amplifiers that bind to the nucleic acid variation probe or splice site probe and neighbor probe, respectively; contacting the sample with a collaboration amplifier that binds to the pre-amplifiers; and contacting the sample with a label probe system, wherein hybridization of the components forms a signal generating complex (SGC) comprising a target nucleic acid with the nucleic acid variation or splice site, the probes and amplifiers; and detecting in situ signal from the SGC on the sample. The invention also provides samples, tissue slides, and kits relating to detection of nucleic acid variations, including single nucleotide variations, multi-nucleotide variations or splice sites, of a target nucleic acid.
本发明涉及原位检测样品中目标核酸变异的方法,包括单核苷酸变异、多核苷酸变异或剪接位点。该方法可包括以下步骤:用检测核酸变异或剪接位点的探针和邻接探针接触样品;用分别与核酸变异探针或剪接位点探针和邻接探针结合的前置放大器接触样品;用与前置放大器结合的协作放大器接触样品;将样品与标记探针系统接触,其中各组分杂交形成信号发生复合物(SGC),该复合物由靶核酸与核酸变异或剪接位点、探针和放大器组成;检测样品上 SGC 的原位信号。本发明还提供了与检测核酸变异(包括目标核酸的单核苷酸变异、多核苷酸变异或剪接位点)有关的样品、组织切片和试剂盒。