The 1: 2 complex of 1,4-dimethylpiperazine mono-betaine (MBPZ) with squaric acid (H(2)SQ) has been characterised by single-crystal X-ray analysis, FTIR and NMR spectroscopies, and by DFT calculations. The crystals are monoclinic, space group P2(1)/c. Two MBPZ cations and four hydrogen squarate anions (HSQ(-)) are linked by strong O(1)=H center dot center dot center dot O(13) (2.525(4) angstrom), O(14)-H center dot center dot center dot O(21) (2.511(4) angstrom) and N(4)-H center dot center dot center dot O(23) (2.607(3)angstrom) hydrogen bonds into a cyclamer R-6(6)(38). In turn, the cyclamers are linked into a helix C-4(4)(20) through two O(24)-H center dot center dot center dot O(11) hydrogen bonds of 2.516(4)angstrom. The piperazinium ring has a chair conformation with N(4)-CH3 and N(1)-CH2COOH substituents in the equatorial positions, and N(1)-CH3 in the axial position. The FTIR spectrum is consistent with the crystal data. Two models of the 1: 2 complex of MBPZ with H(2)SQ have been optimised at the B3LYP/6-311++G(d,p) level of theory and have been used to calculate harmonic IR frequencies. One of the models (2) is dominated by electrostatic attraction between NH(4)(+) and HSQ(-), whereas in the other (3) squaric acid interacts with a zwitterionic MBPZ through the O-H center dot center dot center dot O and O-H center dot center dot center dot N hydrogen bonds.
N,N′-Dimethylpiperazine mono-betaine complex with two molecules of 3-iodobenzoic acid and water studied by X-ray diffraction, DFT, FTIR and NMR methods
作者:Z. Dega-Szafran、A. Katrusiak、M. Szafran
DOI:10.1016/j.molstruc.2007.05.044
日期:2008.3
N,N'-Dimethylpiperazine mono-betaine (N-carboxymethyl-N,N'-dimethylpiperazinium inner salt, MBPZ) forms a crystalline complex with two molecules of 3-iodobenzoic acid (3IBA). The complex crystallizes as a monohydrate, MBPZ(3IBA)(2)H2O. The complex has been characterized by X-ray diffraction and FTIR, Raman, H-1 and C-13 NMR spectroscopies. The crystals are monoclinic, space group P2(1)/c, with a = 6.7810(17), b = 38.391(4), c = 10.0542(16) angstrom, beta = 90.024(18)degrees. The piperazinium ring has a chair conformation with the N+CH2COO- substituent in the axial and both methyl groups in the equatorial positions. The 3IBA molecules interact with the carboxylate group of N+CH2COO- and N' atom through the O-H center dot center dot center dot O and O-H center dot center dot center dot N hydrogen bonds of the lengths 2.550 and 2.695 angstrom. The water molecules link MBPZ(3IBA)(2) complexes by the O-H center dot center dot center dot OOCCH2N+ hydrogen bonds of 2.850 and 2.793 angstrom into infinite chains. The MBPZ(3XBA)(2)H2O (X = I, Br, Cl), MBPZ(3IBA)(2) complexes and MBPZ have been analyzed by the B3LYP/MidiX level of theory. The conformers with the axial CH2COO- substituent have lower energies than these with the equatorial CH2COO- one. The bands at 3433, 2790, 2450, 1915 cm(-1) assigned to the v(OH) vibration of the various hydrogen bonds, and two bands attributed to the v(C=O) (1680 cm(-1)) and v(as)(COO) (1660 cm(-1)) vibrations in the FTIR spectrum confirm the structure of the title complex. The H-1-C-13 HMBC spectrum has been analyzed in order to assign the carbon-13 chemical shifts. (c) 2007 Elsevier B.V. All rights reserved.