The synthesis of 15 N(7)-Hoogsteen face-labeled adenosine phosphoramidite for solid-phase RNA synthesis
摘要:
AbstractWe have developed an efficient route for the synthesis of 15N(7)-labeled adenosine as phosphoramidite building block for site- and atom-specific incorporation into RNA by automated solid-phase synthesis. Such labeled RNA is required for the evaluation of selected non-canonical base pair interactions in folded RNA using NMR spectroscopic methods. Graphical abstract
The synthesis of 15 N(7)-Hoogsteen face-labeled adenosine phosphoramidite for solid-phase RNA synthesis
摘要:
AbstractWe have developed an efficient route for the synthesis of 15N(7)-labeled adenosine as phosphoramidite building block for site- and atom-specific incorporation into RNA by automated solid-phase synthesis. Such labeled RNA is required for the evaluation of selected non-canonical base pair interactions in folded RNA using NMR spectroscopic methods. Graphical abstract
Syntheses of [6,7-15N]-Adenosine, [6,7-15N]-2'-Deoxyadenosine, and [7-15N]-Hypoxanthine
作者:Alex R. Pagano、Wayne M. Lajewski、Roger A. Jones
DOI:10.1021/ja00152a006
日期:1995.11
We have developed a high-yield route for the synthesis of [7-N-15]-hypoxanthine in four steps in an overall yield of 81%. This procedure uses [N-15]-sodium nitrite as the N-15 source and an inexpensive pyrimidine to provide an economical route to this useful N-15-labeled intermediate. Conversion to [7-N-15]-6-chloropurine followed by enzymatic transglycosylation gives the corresponding ribo- and 2'-deoxyribonucleosides. Ammonolysis of the 6-chloro moiety to give the [6,7-N-15]-labeled nucleosides is effected simply and in high yield using 2 equiv of [N-15]-ammonium chloride and 3 equiv of potassium bicarbonate.
Use of <sup>13</sup>C as an Indirect Tag in <sup>15</sup>N Specifically Labeled Nucleosides. Syntheses of [8-<sup>13</sup>C-1,7,NH<sub>2</sub>-<sup>15</sup>N<sub>3</sub>]Adenosine, -Guanosine, and Their Deoxy Analogues
作者:Anthony J. Shallop、Barbara L. Gaffney、Roger A. Jones
DOI:10.1021/jo0345446
日期:2003.10.1
We have previously reported the use of a C-13 tag at the C2 of N-15-multilabeled purine nucleosides to distinguish the adjacent-labeled N-15 atoms from those in an untagged nucleoside. We now introduce the use of an indirect tag at the C8 of (15)N7-labeled purine nucleosides. This tag allows unambiguous differentiation between a pair of (15)N7-labeled purines in which only one is (13)C8 labeled. Although the very small C8-N7 coupling (< 1 Hz) precludes its direct detection in 1D N-15 spectra, 2D H-1-N-15 NMR experiments display the large C8-H8 coupling (>200 Hz) because H8 is coupled to both N7 and C8. The (13)C8 atom is introduced by means of a ring closure of the exocyclic amino groups of a pyrimidinone using [C-13] sodium ethyl xanthate. Here, we present methods for the syntheses of [8-C-13-1,7,NH2- N-15(3)]adenosine, -guanosine, and their deoxy analogues.