申请人:PE Corporation (NY)
公开号:US20010014735A1
公开(公告)日:2001-08-16
Methods and compositions to label oligonucleotides and analogs directly on a solid-support having the structure
1
where S is a solid-support, A is a cleavable linker, X is a moiety with three or more attachment sites, L is a label, Y is a nucleophile, i.e. O, NH, NR or S, and P
1
is an acid cleavable protecting group are provided. The labelled solid-support is reacted in a cyclical fashion to synthesize a labelled oligonucleotide on a solid-support in the 5′ to 3′ direction, having the structure:
2
Labelled oligonucleotides are also synthesized by reacting: (i) a label reagent bearing functionality consisting of carboxylic acid, sulfonic acid, phosphonic acid, or phosphoric acid, (ii) an oligonucleotide on solid support with nucleophilic functionality, and (iii) a coupling reagent, whereby an ester, amide, thioester, sulfonamide, sulfonate, phosphonate, phosphoramidate, phosphorothioate, or phosphate bond is formed. The labelling reaction may be conducted at label sites including the 5′ terminus, the 3′ terminus, a nucleobase, an internucleotide linkage, a sugar, amino, sulfide, hydroxyl, and carboxyl.
在具有以下结构的固体载体上直接标记寡核苷酸和类似物的方法和组合物
1
其中 S 是固体支持物,A 是可裂解连接体,X 是具有三个或更多连接位点的分子,L 是标签,Y 是亲核体,即 O、NH、NR 或 S,以及 P
1
是可被酸裂解的保护基团。标记的固体支持物通过循环反应,在固体支持物上沿 5′至 3′方向合成标记的寡核苷酸,该寡核苷酸具有以下结构:
2
标记的寡核苷酸也可通过以下反应合成:(i) 具有羧酸、磺酸、膦酸或磷酸等官能团的标记试剂;(ii) 具有亲核官能团的固体支持物上的寡核苷酸;(iii) 偶联试剂,从而形成酯、酰胺、硫酯、磺酰胺、磺酸盐、膦酸盐、膦酰胺、硫代磷酸盐或磷酸键。标记反应可在标记位点进行,包括 5′末端、3′末端、核碱基、核苷酸间连接、糖、氨基、硫化物、羟基和羧基。