Crystallographic and conformational analysis of 2-methyl-3-(2-nitro-phenyl)-4-phenyl-[1,2,4]oxadiazolidin-5-one
作者:Hasan Karabıyık、Muhittin Aygün、Necdet Coşkun、Canan Kazak
DOI:10.1007/s10870-005-2859-3
日期:2005.1
Molecular and crystal structure of 2-methyl-3-(2-nitro-phenyl)-4-phenyl-[1,2,4]oxadiazolidin-5-one, C15H13N3O4, have been determined by single crystal X-ray diffraction study. The title compound is monoclinic, with a = 10.0313(8) Å, b = 9.0372(5) Å, c = 15.5964(14) Å, β = 96.926(7)∘, Z = 4, D x = 1.42 g/cm3, μ (Mo-Kα) = 0.105 mm−1, and space group is P 21/c. The structure was solved by direct methods and refined to a final R = 0.036 for 1894 reflections with I > 4σ (I). The crystal structure is stabilized by C–H⋅sO type inter-molecular, C–H⋅sN and C–H⋅sO type intra-molecular, π–π stacking and edge to face (C–H⋅s π-ring) interactions. To enlighten conformational flexibility of the title molecule, selected two torsion angles are varied from −180∘ to +180∘ in every 10∘ separetely and then molecular energy profile is calculated and construed.
通过单晶 X 射线衍射研究确定了 2-甲基-3-(2-硝基苯基)-4-苯基-[1,2,4]恶二唑烷-5-酮 C15H13N3O4 的分子和晶体结构。标题化合物为单斜晶系,a = 10.0313(8) Å, b = 9.0372(5) Å, c = 15.5964(14) Å, β = 96.926(7)∘, Z = 4, D x = 1.42 g/cm3, μ (Mo-Kα) = 0.105 mm-1, 空间群为 P 21/c。该结构通过直接方法求解,并在 1894 次反射中精炼出最终 R = 0.036,I > 4σ (I)。该晶体结构通过 C-H⋅sO 型分子间相互作用、C-H⋅sN 和 C-H⋅sO 型分子内相互作用、π-π 堆积和边到面(C-H⋅s π-环)相互作用而得到稳定。为了揭示标题分子的构象灵活性,所选的两个扭转角从 -180∘ 到 +180∘ 每隔 10∘ 变化一次,然后计算和解释分子能谱。