1-(2,3-dideoxy-3-glycylamino-β-D-erythro-pentofuranosyl)thymine | 142410-40-0

• 分子结构分类: 有机化合物 - 核苷、核苷酸和类似物 - 嘧啶核苷
• 英文名称: 1-(2,3-dideoxy-3-glycylamino-β-D-erythro-pentofuranosyl)thymine
• 英文别名: 2',3'-dideoxy-3'-glycylamino-thymidine；3'-glycylamino-3'-deoxy-thymidine；Gly-aT；2-amino-N-[(2S,3S,5R)-2-(hydroxymethyl)-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]acetamide
• CAS: 142410-40-0
• 化学式: C₁₂H₁₈N₄O₅
• 分子量: 298.299
• InChiKey: YIELNCFVZWZUFK-QXFUBDJGSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  -1.7
• 重原子数：
  21
• 可旋转键数：
  4
• 环数：
  2.0
• sp3杂化的碳原子比例：
  0.58
• 拓扑面积：
  134
• 氢给体数：
  4
• 氢受体数：
  6

反应信息

• 作为产物：
  描述：

  3'-氨基-2',3'-双脱氧胸苷 在 N-羟基丁二酰亚胺 、 N,N'-二环己基碳二亚胺 、 三氟乙酸 作用下， 以 N,N-二甲基甲酰胺 为溶剂， 反应 24.08h， 生成 1-(2,3-dideoxy-3-glycylamino-β-D-erythro-pentofuranosyl)thymine
  参考文献：
  名称：

  抗生素嘌呤霉素作为3'-氨基-3'-脱氧胸苷的潜在前药的类似物

  摘要：

  据报道，在DMF中使用二环己基碳二亚胺和N-羟基琥珀酰亚胺使L-和D-3'-氨基-2'，3'-二脱氧核苷2-5与N -BOC保护的氨基酸6和13缩合，得到N -BOC保护的酰氨aminonucleosides 7- 9和14中51-81％的产率。用三氟乙酸脱保护后，相应的未保护的新的嘌呤霉素10-12和15类似物以43-56％的产率获得。使用HIV（HTLV-III B染色）感染的MT-4细胞作为靶标系统，这些化合物未显示任何显着的抗病毒活性。

  DOI：

  10.1002/jhet.5570290102

文献信息

• Nucleoside–amino acid conjugates: An alternative route to the design of ribonuclease A inhibitors
  作者：Joy Debnath、Swagata Dasgupta、Tanmaya Pathak

  DOI：10.1016/j.bmc.2009.06.002

  日期：2009.7

  Nucleoside-amino acid conjugates have been employed to inhibit the ribonucleolytic activity of ribonuclease A (RNase A) and affect the protonation/deprotonation equilibrium of its active site histidine residues. Agarose gel and precipitation assays indicate inhibition of RNase A activity by these molecules with a possible role of the polar side chains of the amino acids in RNase A inhibition. Kinetic experiments demonstrated that the mode of inhibition is competitive in nature with inhibition constants (K-i) in the micromolar range. The nucleoside-serine conjugate occupies the active site of RNase A and preferential perturbs the pK(a) value of His-119 by its 'free amino group' as found from H-1 NMR studies. Docking studies revealed that the free amino groups of the most active compounds are within hydrogen bonding distance of His-119 in inhibitor-RNase A complexes. (C) 2009 Elsevier Ltd. All rights reserved.
• Inhibitors Interacting with the Magnesium Binding Site of Reverse Transcriptase: Synthesis and Biological Activity Studies of 3′-(Ω-Amino-Acyl) Amino-3′-Deoxy-Thymidine
  作者：Thirumani Venkateshwar Goud、Anne-Marie Aubertin、Jean-François Biellmann

  DOI：10.1080/15257770802088902

  日期：2008.4.18

  Active site of reverse transcriptase contains carboxylate groups involved in the magnesium binding. We prepared some nucleoside analogs which could bind to these carboxylates preventing the binding of nucleotides. To the 3'-amino-3'-deoxy-thymidine, different N-protected omega-amino-acids were bound, the protection removed to give the 3'-(omega-amino-acyl-) amino-3'-deoxy-thymidines in good yield. Some showed moderate to low activity in HIV 1 replication test.
• MORINIERE, JEAN-LUC;FAUIQUES, MICHELLE;ROUSSEAU, CLAUDE;DANREE, BERNARD;M+
  作者：MORINIERE, JEAN-LUC、FAUIQUES, MICHELLE、ROUSSEAU, CLAUDE、DANREE, BERNARD、M+

  DOI：——

  日期：——
• US5212161A
  申请人：——

  公开号：US5212161A

  公开（公告）日：1993-05-18
• Analogues of the antibiotic puromycin as potential prodrugs of 3′-amino-3′-deoxythymidine
  作者：Jesper Wengel、Mohammed S. Motawia、Erik B. Pedersen、Carsten M. Nielsen

  DOI：10.1002/jhet.5570290102

  日期：1992.1

  Condensation of L- and D-3′-amino-2′,3′-dideoxynucleosides 2–5 with N-BOC-protected aminoacids 6 and 13 using dicyclohexylcarbodiimide and N-hydroxysuccinimide in DMF is reported to give the N-BOC-protected acylamino aminonucleosides 7–9 and 14 in 51–81% yield. After deprotection using trifluoroacetic acid the corresponding unprotected new analogues of puromucin 10–12 and 15 were obtained in 43–56%

  据报道，在DMF中使用二环己基碳二亚胺和N-羟基琥珀酰亚胺使L-和D-3'-氨基-2'，3'-二脱氧核苷2-5与N -BOC保护的氨基酸6和13缩合，得到N -BOC保护的酰氨aminonucleosides 7- 9和14中51-81％的产率。用三氟乙酸脱保护后，相应的未保护的新的嘌呤霉素10-12和15类似物以43-56％的产率获得。使用HIV（HTLV-III B染色）感染的MT-4细胞作为靶标系统，这些化合物未显示任何显着的抗病毒活性。