IDENTIFICATION AND TARGETED MODULATION OF GENE SIGNALING NETWORKS
申请人:CAMP4 THERAPEUTICS CORPORATION
公开号:US20210254056A1
公开(公告)日:2021-08-19
The present invention provides methods and compositions for the evaluation, alteration and/or optimization of gene signaling. Methods and systems are also provided which exploit the information generated in the identification of new targets and non-canonical signaling pathways.
US7756674B2
申请人:——
公开号:US7756674B2
公开(公告)日:2010-07-13
US7970580B2
申请人:——
公开号:US7970580B2
公开(公告)日:2011-06-28
US7970581B2
申请人:——
公开号:US7970581B2
公开(公告)日:2011-06-28
[EN] METHODS AND SYSTEMS OF CALCULATING DIFFERENCES OF BINDING AFFINITIES BETWEEN CONGENERIC PAIRS OF LIGANDS<br/>[FR] PROCÉDÉS ET SYSTÈMES DE CALCUL DE DIFFÉRENCES D'AFFINITÉS DE LIAISON ENTRE DES PAIRES CONGÉNÈRES DE LIGANDS
申请人:UNIV COLUMBIA
公开号:WO2009020887A1
公开(公告)日:2009-02-12
Described is a technique to exhaustively enumerate the thermodynamic properties of the water molecules solvating the active site of a protein in its apostate and calculate the relative binding affinities of congeneric compounds that bind to this protein. The subject matter includes sampling the configurations of the solvating water in the active site; extracting the thermodynamic information about the solvating water from these configurations by clustering the observed water configurations into regions of high water occupancy (e.g., 'hydration sites'), computing the average system interaction energies of water molecules occupying the various hydrations sites, computing excess entropies of water molecules occupying the hydration sites; constructing a 3 dimensional hydration thermodynamics map of the protein active site; and computing relative binding affinities of congeneric ligands based on the principle that tighter binding ligands can displace more entropically structured and energetically depleted hydration sites from the active site into the bulk fluid.