Synthesis and evaluation of conformationally constrained peptide analogues as the Src SH3 domain binding ligands
作者:Rakesh Tiwari、Alex Brown、Seetha Narramaneni、Gongqin Sun、Keykavous Parang
DOI:10.1016/j.biochi.2010.01.017
日期:2010.9
activity is a subject of major interest. Conformationally constrained peptides have been previously used for improving the binding potency of the Src SH2 domain binding peptide ligands and peptide substrates of the substrate-binding site of Src. A series of peptide analogues of Ac-VSLARRPLPPLP (1, Ac-VSL12, Kd=0.34 microM) were synthesized by introducing conformational constraints to improve the binding
Src激酶活性受SH3域与富含脯氨酸残基的蛋白质序列相互作用的调节。可以调节Src激酶活性的更有效的SH3结构域结合配体的鉴定是一个重要的课题。构象受限的肽先前已用于改善Src SH2结构域结合肽配体和Src的底物结合位点的肽底物的结合能力。通过引入构象限制以改善对Src SH3结构域的结合亲和力,合成了一系列Ac-VSLARRPLPPLP的肽类似物(1,Ac-VSL12,Kd = 0.34 microM)。通过N末端至C末端[VSLARRPLPPLP]或N末端至侧链侧翼残基之间的环化合成的肽(即[βAVS] LARRPLPPLP和[VSLE] RRPLPPLP)显示至少6。与1相比,结合亲和力低4倍(Kd = 2.19-4.85 microM)。数据表明,在带有C末端或侧翼残基的N末端环化后,核心RPLPPLP中氨基酸的相互作用随残基显着降低在Src SH3域中。构象受限的肽V [SLA