(S)-N(6),N(8)-bis[N',N'-di(n-butyl)formamidine]-6,8-diamino-3-[3-(4,4'-dimethoxytrityloxy)-2-hydroxypropyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine | 1367333-32-1

• 分子结构分类: 有机化合物 - 苯类化合物 - 三苯基化合物
• 英文名称: (S)-N(6),N(8)-bis[N',N'-di(n-butyl)formamidine]-6,8-diamino-3-[3-(4,4'-dimethoxytrityloxy)-2-hydroxypropyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine
• CAS: 1367333-32-1
• 化学式: C₅₀H₆₅N₉O₄
• 分子量: 856.124
• InChiKey: OHJFXWXBTXWPNW-RWYGWLOXSA-N

计算性质

• 辛醇/水分配系数(LogP)：
  9.89
• 重原子数：
  63.0
• 可旋转键数：
  26.0
• 环数：
  6.0
• sp3杂化的碳原子比例：
  0.44
• 拓扑面积：
  135.61
• 氢给体数：
  1.0
• 氢受体数：
  11.0

反应信息

• 作为反应物：
  描述：

  (S)-N(6),N(8)-bis[N',N'-di(n-butyl)formamidine]-6,8-diamino-3-[3-(4,4'-dimethoxytrityloxy)-2-hydroxypropyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine 、 2-氰乙基N,N-二异丙基氯亚磷酰胺 在 N,N-二异丙基乙胺 作用下， 以 四氢呋喃 为溶剂， 反应 3.0h， 以93%的产率得到(S)-N(6),N(8)-bis[N',N'-di(n-butyl)formamidine]-6,8-diamino-3-[3-(4,4'-dimethoxytrityloxy)-2-[[(2-cyanoethoxy)(N,N-diisopropylamino)phosphanyl]oxy]propyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine
  参考文献：
  名称：

  Fluorescence detection of single nucleotide polymorphisms using nucleic acid probe containing tricyclic base-linked acyclonucleoside

  摘要：

  A reliable and simple method for detecting nucleobase mutations is very important clinically because sequence variations in human DNA cause genetic diseases and genetically influenced traits. A majority of sequence variations are attributed to single nucleotide polymorphisms (SNPs). Here, we developed a method for SNP detection using DNA probes that contained a fluorescent tricyclic base-linked acyclonucleoside N. The type of nucleobases involved in the SNP sites in an RNA target could be determined using four DNA probes containing N. Further, we found that the SNP in the RNA target could be detected by a visible color. Thus, this system would provide a novel and simple method for detecting SNPs in an RNA target. (C) 2011 Elsevier Ltd. All rights reserved.

  DOI：

  10.1016/j.bmcl.2011.11.022
• 作为产物：
  描述：

  (S)-6,8-diamino-3-[2,3-dihydroxypropyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine 在 吡啶 作用下， 以 N,N-二甲基甲酰胺 为溶剂， 反应 27.0h， 生成 (S)-N(6),N(8)-bis[N',N'-di(n-butyl)formamidine]-6,8-diamino-3-[3-(4,4'-dimethoxytrityloxy)-2-hydroxypropyl]imidazo[4',5':5,6]pyrido[2,3-d]pyrimidine
  参考文献：
  名称：

  Fluorescence detection of single nucleotide polymorphisms using nucleic acid probe containing tricyclic base-linked acyclonucleoside

  摘要：

  A reliable and simple method for detecting nucleobase mutations is very important clinically because sequence variations in human DNA cause genetic diseases and genetically influenced traits. A majority of sequence variations are attributed to single nucleotide polymorphisms (SNPs). Here, we developed a method for SNP detection using DNA probes that contained a fluorescent tricyclic base-linked acyclonucleoside N. The type of nucleobases involved in the SNP sites in an RNA target could be determined using four DNA probes containing N. Further, we found that the SNP in the RNA target could be detected by a visible color. Thus, this system would provide a novel and simple method for detecting SNPs in an RNA target. (C) 2011 Elsevier Ltd. All rights reserved.

  DOI：

  10.1016/j.bmcl.2011.11.022